Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Ackr4-203ENSMUST00000188000 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Bag3-201ENSMUST00000033136 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Dkk3-201ENSMUST00000033036 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm8968-201ENSMUST00000199133 1303 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Aldh1l1-201ENSMUST00000032175 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm8908-201ENSMUST00000121633 1024 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm25043-201ENSMUST00000158604 212 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm26927-201ENSMUST00000182385 965 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm9230-201ENSMUST00000188228 532 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm6266-201ENSMUST00000203844 806 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm37074-201ENSMUST00000193444 1843 ntBASIC8.35□□□□□ -1.07
Trim63Q38HM4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Wdr27-201ENSMUST00000170386 2574 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Dpp8-202ENSMUST00000167773 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Hsd17b7-201ENSMUST00000027989 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Mtmr6-203ENSMUST00000224366 1968 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Ankrd6-205ENSMUST00000108166 2321 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim63Q38HM4 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Chid1-201ENSMUST00000026586 3964 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm15604-201ENSMUST00000118350 1456 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm38059-201ENSMUST00000193746 1999 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm15554-201ENSMUST00000120406 913 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm27437-201ENSMUST00000183429 107 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm18018-201ENSMUST00000198273 408 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim63Q38HM4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm6853-201ENSMUST00000211160 1041 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim63Q38HM4 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 CT010431.1-201ENSMUST00000221249 1080 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 AC140375.2-201ENSMUST00000225283 584 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.34□□□□□ -1.07
Trim63Q38HM4 CT025535.1-201ENSMUST00000227172 491 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms