Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm11919-201ENSMUST00000117609 721 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm13094-201ENSMUST00000117930 409 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm16459-201ENSMUST00000121443 686 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm38321-201ENSMUST00000195053 235 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm38349-201ENSMUST00000195732 462 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm44304-201ENSMUST00000200509 145 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Btrc-206ENSMUST00000224102 3037 ntBASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdhga4Q91XY4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm22594-201ENSMUST00000104251 130 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm42780-201ENSMUST00000197083 734 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm43547-201ENSMUST00000197729 328 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm29763-201ENSMUST00000205306 616 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 256.5 ms