Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Gm13254-201ENSMUST00000118295 654 ntBASIC12.72□□□□□ -0.37
Cacna1sQ02789 Rpl9-ps3-201ENSMUST00000119147 576 ntBASIC12.72□□□□□ -0.37
Cacna1sQ02789 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1sQ02789 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Camk2a-202ENSMUST00000039904 1734 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1sQ02789 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1sQ02789 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm37484-201ENSMUST00000195378 2523 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 AC140299.1-201ENSMUST00000217855 1510 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm3712-201ENSMUST00000118523 2071 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm11832-201ENSMUST00000148576 432 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mir6239-201ENSMUST00000183564 105 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm5266-201ENSMUST00000187302 1162 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm28865-201ENSMUST00000187685 723 ntTSL 3 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm33815-205ENSMUST00000195574 1204 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gm7434-201ENSMUST00000208558 408 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Cbr1-201ENSMUST00000039659 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mrpl55-201ENSMUST00000045697 940 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Clrn2-201ENSMUST00000053250 944 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Mir212-201ENSMUST00000083656 91 ntBASIC12.71□□□□□ -0.37
Cacna1sQ02789 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1sQ02789 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1sQ02789 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Gm34821-202ENSMUST00000209114 1949 ntTSL 5 BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1sQ02789 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Igkv4-86-201ENSMUST00000103337 340 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm12019-201ENSMUST00000121258 532 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm15050-201ENSMUST00000133723 552 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm11431-201ENSMUST00000155046 428 ntTSL 3 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm37994-201ENSMUST00000192124 409 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm6375-201ENSMUST00000205201 1145 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm16475-202ENSMUST00000209033 528 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm4889-201ENSMUST00000075321 444 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Snap47-201ENSMUST00000010038 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1sQ02789 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC12.7□□□□□ -0.38
Cacna1sQ02789 Mir6974-201ENSMUST00000184381 83 ntBASIC12.7□□□□□ -0.38
Cacna1sQ02789 Alg14-204ENSMUST00000199554 441 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms