Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm11578-201ENSMUST00000118530 459 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm16459-201ENSMUST00000121443 686 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm12035-201ENSMUST00000121890 623 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23400-201ENSMUST00000174994 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm26463-201ENSMUST00000175065 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm24332-201ENSMUST00000175102 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25959-201ENSMUST00000175112 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm22475-201ENSMUST00000175169 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm22903-201ENSMUST00000175193 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25070-201ENSMUST00000175237 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm24159-201ENSMUST00000175264 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25299-201ENSMUST00000175283 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23798-201ENSMUST00000175560 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23802-201ENSMUST00000175565 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25708-201ENSMUST00000177687 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm24370-201ENSMUST00000178007 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23049-201ENSMUST00000178068 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm28019-201ENSMUST00000178138 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25571-201ENSMUST00000178322 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25355-201ENSMUST00000178456 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm24975-201ENSMUST00000178492 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23189-201ENSMUST00000178954 102 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm25100-201ENSMUST00000179750 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm23064-201ENSMUST00000179866 101 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Mir6941-201ENSMUST00000184711 59 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm21156-201ENSMUST00000189693 869 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm6794-201ENSMUST00000203829 457 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm18123-201ENSMUST00000210874 822 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm18122-201ENSMUST00000211390 904 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm18001-201ENSMUST00000212023 688 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm4865-201ENSMUST00000196284 1309 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.72□□□□□ -0.85
Clrn1Q8K445 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Clrn1Q8K445 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC9.71□□□□□ -0.85
Clrn1Q8K445 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Clrn1Q8K445 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.71□□□□□ -0.86
Clrn1Q8K445 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms