Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm43061-201ENSMUST00000198850 2241 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm7781-201ENSMUST00000117258 788 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm7847-201ENSMUST00000151645 777 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm3534-201ENSMUST00000182522 1001 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Gm8955-201ENSMUST00000182945 1008 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm18124-201ENSMUST00000210695 706 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Lmo4P61969 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
Lmo4P61969 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 AC154683.1-201ENSMUST00000228409 1284 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm42714-201ENSMUST00000202063 1364 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Lmo4P61969 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Lmo4P61969 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm44547-201ENSMUST00000207793 1446 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Lmo4P61969 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm5046-201ENSMUST00000100608 611 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm14239-201ENSMUST00000116491 685 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Gm13215-201ENSMUST00000117559 472 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Gm13758-201ENSMUST00000118699 743 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Scgb1b21-201ENSMUST00000170232 268 ntBASIC8.31□□□□□ -1.08
Lmo4P61969 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Lmo4P61969 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC8.31□□□□□ -1.08
Lmo4P61969 AC134537.1-201ENSMUST00000219205 265 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms