Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm12716-201ENSMUST00000120606 1354 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Fv4P11370 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm22937-201ENSMUST00000103954 131 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm16581-201ENSMUST00000160730 991 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC9.93□□□□□ -0.82
Fv4P11370 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Fv4P11370 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Gm6423-201ENSMUST00000204315 934 ntBASIC9.93□□□□□ -0.82
Fv4P11370 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.93□□□□□ -0.82
Fv4P11370 Gm2253-201ENSMUST00000211775 414 ntBASIC9.93□□□□□ -0.82
Fv4P11370 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.93□□□□□ -0.82
Fv4P11370 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Fv4P11370 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC9.93□□□□□ -0.82
Fv4P11370 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.93□□□□□ -0.82
Fv4P11370 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Fv4P11370 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Fv4P11370 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.93□□□□□ -0.82
Fv4P11370 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fv4P11370 Gm31763-202ENSMUST00000218205 1724 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Gm5472-201ENSMUST00000178604 1678 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Gm37302-201ENSMUST00000192958 2998 ntBASIC9.93□□□□□ -0.82
Fv4P11370 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.93□□□□□ -0.82
Fv4P11370 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.92□□□□□ -0.82
Fv4P11370 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Fv4P11370 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gm11560-201ENSMUST00000117567 948 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm12733-201ENSMUST00000119871 767 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm16547-201ENSMUST00000159474 293 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm7539-201ENSMUST00000189789 630 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm19587-201ENSMUST00000191395 545 ntBASIC9.92□□□□□ -0.82
Fv4P11370 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm43969-201ENSMUST00000204833 535 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.92□□□□□ -0.82
Fv4P11370 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gm7904-201ENSMUST00000217049 465 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC9.92□□□□□ -0.82
Fv4P11370 Gm8557-201ENSMUST00000220777 475 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.92□□□□□ -0.82
Fv4P11370 AC134860.2-201ENSMUST00000225277 1036 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Fv4P11370 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Fv4P11370 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.92□□□□□ -0.82
Fv4P11370 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Fv4P11370 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fv4P11370 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms