Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smarcd2Q99JR8 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm9095-201ENSMUST00000117607 881 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm5054-201ENSMUST00000119351 453 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm15798-201ENSMUST00000120082 408 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm9097-201ENSMUST00000120514 880 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm5259-201ENSMUST00000191231 800 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm34780-201ENSMUST00000193896 949 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.44□□□□□ -0.74
Smarcd2Q99JR8 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm8163-201ENSMUST00000122020 1060 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm8955-201ENSMUST00000182945 1008 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm8268-201ENSMUST00000209683 458 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 AC129590.1-201ENSMUST00000225573 852 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 AC140426.1-201ENSMUST00000227933 459 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Gm20953-201ENSMUST00000216399 2614 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd2Q99JR8 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC10.42□□□□□ -0.74
Smarcd2Q99JR8 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms