Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.38□□□□□ -0.75
Rad54bQ6PFE3 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm15131-201ENSMUST00000119124 595 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm16574-201ENSMUST00000159301 745 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm16581-201ENSMUST00000160730 991 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm17221-201ENSMUST00000163909 481 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm17073-201ENSMUST00000168069 556 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm29410-201ENSMUST00000188383 694 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm29157-201ENSMUST00000188753 612 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm37365-201ENSMUST00000193109 409 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm2897-201ENSMUST00000166494 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm3411-201ENSMUST00000170104 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Gm45153-201ENSMUST00000205957 1901 ntBASIC10.37□□□□□ -0.75
Rad54bQ6PFE3 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm42735-201ENSMUST00000201718 1646 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm44070-201ENSMUST00000203389 2220 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm13914-201ENSMUST00000118202 991 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm13937-201ENSMUST00000121000 988 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm16441-201ENSMUST00000138176 924 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm6038-201ENSMUST00000154310 948 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Mir1943-201ENSMUST00000158276 73 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm9372-201ENSMUST00000168454 430 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm44216-201ENSMUST00000203942 157 ntBASIC10.36□□□□□ -0.75
Rad54bQ6PFE3 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms