Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm25661-201ENSMUST00000157704 296 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm7672-201ENSMUST00000180915 872 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm6967-201ENSMUST00000182599 1007 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm9409-201ENSMUST00000197017 316 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm19090-201ENSMUST00000218187 774 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Nln-205ENSMUST00000224945 2486 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm10344-201ENSMUST00000193498 1419 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm13047-201ENSMUST00000117116 815 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm13197-201ENSMUST00000117204 225 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm5501-201ENSMUST00000165917 832 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm4705-201ENSMUST00000177415 354 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm27444-201ENSMUST00000184157 137 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm6331-201ENSMUST00000217890 450 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm42731-201ENSMUST00000201839 1641 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm8446-201ENSMUST00000188834 2712 ntBASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Vps54Q5SPW0 Gm11427-201ENSMUST00000117952 1696 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 CT009713.3-201ENSMUST00000224987 1565 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm24981-201ENSMUST00000104459 132 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm14176-201ENSMUST00000121302 477 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm23999-201ENSMUST00000158057 104 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm44236-201ENSMUST00000204492 513 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms