Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.76□□□□□ -0.85
Clrn1Q8K445 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Clrn1Q8K445 Gm12716-201ENSMUST00000120606 1354 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm15602-201ENSMUST00000116162 465 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm11996-201ENSMUST00000117538 915 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm25569-201ENSMUST00000157175 131 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm23958-201ENSMUST00000157207 105 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm23218-201ENSMUST00000158124 276 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm24328-201ENSMUST00000175104 67 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm5130-201ENSMUST00000210233 959 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 CT009754.4-201ENSMUST00000221430 565 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 AC101205.2-201ENSMUST00000226206 715 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm26782-203ENSMUST00000227103 751 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Nsmce2-203ENSMUST00000227173 1122 ntBASIC9.75□□□□□ -0.85
Clrn1Q8K445 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Clrn1Q8K445 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Clrn1Q8K445 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.74□□□□□ -0.85
Clrn1Q8K445 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Clrn1Q8K445 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms