Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.31□□□□□ -0.76
Pcdh19Q80TF3 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Snora68-201ENSMUST00000104375 131 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm24470-201ENSMUST00000104486 132 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm12337-201ENSMUST00000119634 400 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm26736-201ENSMUST00000180425 1236 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm28916-201ENSMUST00000186988 699 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm5340-201ENSMUST00000203733 880 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm8615-201ENSMUST00000025307 771 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh19Q80TF3 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms