Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm13611-201ENSMUST00000118269 318 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm11824-201ENSMUST00000120191 846 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm37020-201ENSMUST00000195303 992 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm6649-201ENSMUST00000199743 1165 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim13Q9CYB0 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm16166-201ENSMUST00000118291 787 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm13408-201ENSMUST00000119822 798 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm15432-201ENSMUST00000121106 195 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm13935-201ENSMUST00000121859 798 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm25343-201ENSMUST00000157460 107 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm43671-201ENSMUST00000200422 433 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 AC154431.1-201ENSMUST00000224910 880 ntBASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim13Q9CYB0 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms