Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm12733-201ENSMUST00000119871 767 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm13688-201ENSMUST00000121557 608 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm15620-201ENSMUST00000122949 270 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm6773-201ENSMUST00000182377 878 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm8796-201ENSMUST00000219122 936 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm6478-201ENSMUST00000099450 742 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm31763-202ENSMUST00000218205 1724 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm24791-201ENSMUST00000104284 131 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm6441-201ENSMUST00000120983 696 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm17070-201ENSMUST00000170463 784 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm17782-201ENSMUST00000174345 880 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm8601-201ENSMUST00000182096 909 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim9Q8C7M3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trim9Q8C7M3 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim9Q8C7M3 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim9Q8C7M3 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.4□□□□□ -0.59
Trim9Q8C7M3 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Mettl8-204ENSMUST00000112186 2347 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Gm11736-201ENSMUST00000121468 505 ntBASIC11.39□□□□□ -0.59
Trim9Q8C7M3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim9Q8C7M3 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms