Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Speer3W4VSP1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Speer3W4VSP1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Etf1-202ENSMUST00000180351 108 ntBASIC20.02■□□□□ 0.8
Speer3W4VSP1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Speer3W4VSP1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Speer3W4VSP1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.02■□□□□ 0.79
Speer3W4VSP1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Speer3W4VSP1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Speer3W4VSP1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Gm7417-201ENSMUST00000192950 473 ntBASIC20.01■□□□□ 0.79
Speer3W4VSP1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.01■□□□□ 0.79
Speer3W4VSP1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.01■□□□□ 0.79
Speer3W4VSP1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.01■□□□□ 0.79
Speer3W4VSP1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Speer3W4VSP1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Speer3W4VSP1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20■□□□□ 0.79
Speer3W4VSP1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20■□□□□ 0.79
Speer3W4VSP1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.99■□□□□ 0.79
Speer3W4VSP1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Speer3W4VSP1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.98■□□□□ 0.79
Speer3W4VSP1 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.98■□□□□ 0.79
Speer3W4VSP1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Speer3W4VSP1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms