Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2afb3S4R1G7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
H2afb3S4R1G7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
H2afb3S4R1G7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2afb3S4R1G7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Gm7417-201ENSMUST00000192950 473 ntBASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H2afb3S4R1G7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H2afb3S4R1G7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Mir6236-201ENSMUST00000184437 123 ntBASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Gm9870-201ENSMUST00000063874 645 ntBASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
H2afb3S4R1G7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
H2afb3S4R1G7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
H2afb3S4R1G7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.71■□□□□ 0.42
H2afb3S4R1G7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H2afb3S4R1G7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Gm5812-201ENSMUST00000061073 957 ntBASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H2afb3S4R1G7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms