Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn3Q9Z0G9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.02■□□□□ 0.8
Cldn3Q9Z0G9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Cldn3Q9Z0G9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn3Q9Z0G9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn3Q9Z0G9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn3Q9Z0G9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn3Q9Z0G9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn3Q9Z0G9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn3Q9Z0G9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn3Q9Z0G9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cldn3Q9Z0G9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.96■□□□□ 0.79
Cldn3Q9Z0G9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn3Q9Z0G9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn3Q9Z0G9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms