Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfwd2Q9R1A8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfwd2Q9R1A8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.33■□□□□ 0.85
Rfwd2Q9R1A8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rfwd2Q9R1A8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfwd2Q9R1A8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfwd2Q9R1A8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfwd2Q9R1A8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfwd2Q9R1A8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfwd2Q9R1A8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfwd2Q9R1A8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd2Q9R1A8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Rfwd2Q9R1A8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd2Q9R1A8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfwd2Q9R1A8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfwd2Q9R1A8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfwd2Q9R1A8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms