Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Herpud2Q9JJC9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Herpud2Q9JJC9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Herpud2Q9JJC9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.83■□□□□ 0.77
Herpud2Q9JJC9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Herpud2Q9JJC9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herpud2Q9JJC9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herpud2Q9JJC9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Herpud2Q9JJC9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Herpud2Q9JJC9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Herpud2Q9JJC9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud2Q9JJC9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud2Q9JJC9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud2Q9JJC9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud2Q9JJC9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.77■□□□□ 0.76
Herpud2Q9JJC9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Herpud2Q9JJC9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Herpud2Q9JJC9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms