Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp1bQ9EPL6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp1bQ9EPL6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mmp1bQ9EPL6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mmp1bQ9EPL6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp1bQ9EPL6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp1bQ9EPL6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp1bQ9EPL6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp1bQ9EPL6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp1bQ9EPL6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mmp1bQ9EPL6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp1bQ9EPL6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp1bQ9EPL6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp1bQ9EPL6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp1bQ9EPL6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Mmp1bQ9EPL6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Mmp1bQ9EPL6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp1bQ9EPL6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp1bQ9EPL6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms