Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Gm10232-201ENSMUST00000089221 720 ntBASIC18.78■□□□□ 0.6
Cntd1Q9D995 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntd1Q9D995 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.77■□□□□ 0.6
Cntd1Q9D995 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.77■□□□□ 0.6
Cntd1Q9D995 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntd1Q9D995 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntd1Q9D995 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntd1Q9D995 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntd1Q9D995 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntd1Q9D995 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cntd1Q9D995 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntd1Q9D995 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cntd1Q9D995 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cntd1Q9D995 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cntd1Q9D995 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cntd1Q9D995 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntd1Q9D995 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.71■□□□□ 0.59
Cntd1Q9D995 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cntd1Q9D995 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cntd1Q9D995 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms