Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.56■□□□□ 0.24
ShpkQ9D5J6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ShpkQ9D5J6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ShpkQ9D5J6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.53■□□□□ 0.24
ShpkQ9D5J6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ShpkQ9D5J6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ShpkQ9D5J6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ShpkQ9D5J6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ShpkQ9D5J6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ShpkQ9D5J6 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ShpkQ9D5J6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Gm6821-201ENSMUST00000107540 542 ntBASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.5■□□□□ 0.23
ShpkQ9D5J6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ShpkQ9D5J6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ShpkQ9D5J6 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms