Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd1Q9D0E3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd1Q9D0E3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd1Q9D0E3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Lysmd1Q9D0E3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lysmd1Q9D0E3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd1Q9D0E3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Lysmd1Q9D0E3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd1Q9D0E3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lysmd1Q9D0E3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Lysmd1Q9D0E3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd1Q9D0E3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd1Q9D0E3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.62■■□□□ 1.05
Lysmd1Q9D0E3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd1Q9D0E3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd1Q9D0E3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd1Q9D0E3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd1Q9D0E3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd1Q9D0E3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Mir1199-201ENSMUST00000117015 119 ntBASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd1Q9D0E3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd1Q9D0E3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd1Q9D0E3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lysmd1Q9D0E3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lysmd1Q9D0E3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd1Q9D0E3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms