Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hcfc1r1Q9CYQ5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hcfc1r1Q9CYQ5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcfc1r1Q9CYQ5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcfc1r1Q9CYQ5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hcfc1r1Q9CYQ5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hcfc1r1Q9CYQ5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hcfc1r1Q9CYQ5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hcfc1r1Q9CYQ5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.08■□□□□ 0.33
Hcfc1r1Q9CYQ5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Hcfc1r1Q9CYQ5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1r1Q9CYQ5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1r1Q9CYQ5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hcfc1r1Q9CYQ5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hcfc1r1Q9CYQ5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hcfc1r1Q9CYQ5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hcfc1r1Q9CYQ5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms