Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm5Q9CXE0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prdm5Q9CXE0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Golgb1-201ENSMUST00000023534 498 ntBASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Gm9847-201ENSMUST00000052528 599 ntBASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Prdm5Q9CXE0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prdm5Q9CXE0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prdm5Q9CXE0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Prdm5Q9CXE0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prdm5Q9CXE0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prdm5Q9CXE0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prdm5Q9CXE0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prdm5Q9CXE0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms