Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pfdn1Q9CWM4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pfdn1Q9CWM4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pfdn1Q9CWM4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pfdn1Q9CWM4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pfdn1Q9CWM4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pfdn1Q9CWM4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pfdn1Q9CWM4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pfdn1Q9CWM4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.38■□□□□ 0.37
Pfdn1Q9CWM4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms