Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc3Q9CW03 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc3Q9CW03 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc3Q9CW03 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc3Q9CW03 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc3Q9CW03 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.28■■□□□ 1.32
Smc3Q9CW03 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc3Q9CW03 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc3Q9CW03 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc3Q9CW03 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.27■■□□□ 1.32
Smc3Q9CW03 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc3Q9CW03 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Smc3Q9CW03 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Mir6236-201ENSMUST00000184437 123 ntBASIC23.26■■□□□ 1.31
Smc3Q9CW03 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smc3Q9CW03 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Gm9870-201ENSMUST00000063874 645 ntBASIC23.26■■□□□ 1.31
Smc3Q9CW03 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smc3Q9CW03 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc3Q9CW03 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.24■■□□□ 1.31
Smc3Q9CW03 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Smc3Q9CW03 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc3Q9CW03 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc3Q9CW03 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.23■■□□□ 1.31
Smc3Q9CW03 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.23■■□□□ 1.31
Smc3Q9CW03 Gm43530-201ENSMUST00000195920 274 ntBASIC23.23■■□□□ 1.31
Smc3Q9CW03 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc3Q9CW03 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc3Q9CW03 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.23■■□□□ 1.31
Smc3Q9CW03 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Smc3Q9CW03 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc3Q9CW03 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc3Q9CW03 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Smc3Q9CW03 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Smc3Q9CW03 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc3Q9CW03 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Gm7417-201ENSMUST00000192950 473 ntBASIC23.2■■□□□ 1.3
Smc3Q9CW03 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc3Q9CW03 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.19■■□□□ 1.3
Smc3Q9CW03 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Smc3Q9CW03 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.18■■□□□ 1.3
Smc3Q9CW03 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc3Q9CW03 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc3Q9CW03 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms