Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Thumpd1Q99J36 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Thumpd1Q99J36 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Thumpd1Q99J36 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Thumpd1Q99J36 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Gm45444-201ENSMUST00000211394 898 ntBASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Thumpd1Q99J36 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd1Q99J36 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Gm7143-201ENSMUST00000222811 859 ntBASIC17.62■□□□□ 0.41
Thumpd1Q99J36 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Thumpd1Q99J36 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Thumpd1Q99J36 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Mir6538-201ENSMUST00000183713 110 ntBASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd1Q99J36 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd1Q99J36 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd1Q99J36 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.58■□□□□ 0.41
Thumpd1Q99J36 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd1Q99J36 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd1Q99J36 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.58■□□□□ 0.4
Thumpd1Q99J36 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd1Q99J36 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Mir6236-201ENSMUST00000184437 123 ntBASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd1Q99J36 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms