Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp1aQ921W0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp1aQ921W0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp1aQ921W0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp1aQ921W0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp1aQ921W0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp1aQ921W0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Gm11175-201ENSMUST00000116172 543 ntBASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp1aQ921W0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms