Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhgc3Q91XX1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Pcdhgc3Q91XX1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgc3Q91XX1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhgc3Q91XX1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Pcdhgc3Q91XX1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhgc3Q91XX1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhgc3Q91XX1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhgc3Q91XX1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhgc3Q91XX1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhgc3Q91XX1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhgc3Q91XX1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgc3Q91XX1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgc3Q91XX1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgc3Q91XX1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhgc3Q91XX1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhgc3Q91XX1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhgc3Q91XX1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms