Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Odf4Q8VI88 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.54■□□□□ 0.4
Odf4Q8VI88 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Odf4Q8VI88 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.53■□□□□ 0.4
Odf4Q8VI88 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.53■□□□□ 0.4
Odf4Q8VI88 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Odf4Q8VI88 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Odf4Q8VI88 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Odf4Q8VI88 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Odf4Q8VI88 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Odf4Q8VI88 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Gm9870-201ENSMUST00000063874 645 ntBASIC17.49■□□□□ 0.39
Odf4Q8VI88 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Odf4Q8VI88 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Odf4Q8VI88 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms