Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh18Q8VHR0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Gm43566-201ENSMUST00000196851 808 ntBASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh18Q8VHR0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Gm13238-201ENSMUST00000117655 780 ntBASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdh18Q8VHR0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdh18Q8VHR0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdh18Q8VHR0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdh18Q8VHR0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.94■□□□□ 0.62
Pcdh18Q8VHR0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdh18Q8VHR0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdh18Q8VHR0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdh18Q8VHR0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms