Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rab40bQ8VHP8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rab40bQ8VHP8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rab40bQ8VHP8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Gm10399-202ENSMUST00000202768 748 ntBASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rab40bQ8VHP8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Gm45444-201ENSMUST00000211394 898 ntBASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Rab40bQ8VHP8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rab40bQ8VHP8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rab40bQ8VHP8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab40bQ8VHP8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Gm7143-201ENSMUST00000222811 859 ntBASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Rab40bQ8VHP8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab40bQ8VHP8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab40bQ8VHP8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab40bQ8VHP8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab40bQ8VHP8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms