Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rnf8Q8VC56 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Rnf8Q8VC56 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf8Q8VC56 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf8Q8VC56 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf8Q8VC56 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf8Q8VC56 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf8Q8VC56 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Gm12922-201ENSMUST00000120626 809 ntBASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf8Q8VC56 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf8Q8VC56 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf8Q8VC56 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf8Q8VC56 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms