Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Chrna3Q8R4G9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna3Q8R4G9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.44■□□□□ 0.7
Chrna3Q8R4G9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Chrna3Q8R4G9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna3Q8R4G9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chrna3Q8R4G9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna3Q8R4G9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna3Q8R4G9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna3Q8R4G9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna3Q8R4G9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna3Q8R4G9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna3Q8R4G9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna3Q8R4G9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms