Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdt1Q8R4E9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdt1Q8R4E9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.15■□□□□ 0.66
Cdt1Q8R4E9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdt1Q8R4E9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdt1Q8R4E9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdt1Q8R4E9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Gm7291-201ENSMUST00000199147 382 ntBASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdt1Q8R4E9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdt1Q8R4E9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdt1Q8R4E9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cdt1Q8R4E9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdt1Q8R4E9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdt1Q8R4E9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdt1Q8R4E9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cdt1Q8R4E9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdt1Q8R4E9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms