Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacnb1Q8R3Z5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Mir6236-201ENSMUST00000184437 123 ntBASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cacnb1Q8R3Z5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Cacnb1Q8R3Z5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacnb1Q8R3Z5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cacnb1Q8R3Z5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Cacnb1Q8R3Z5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cacnb1Q8R3Z5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Gm43137-201ENSMUST00000198052 594 ntBASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Gm43930-201ENSMUST00000203868 845 ntBASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Cacnb1Q8R3Z5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacnb1Q8R3Z5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacnb1Q8R3Z5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms