Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col23a1Q8K4G2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col23a1Q8K4G2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col23a1Q8K4G2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col23a1Q8K4G2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col23a1Q8K4G2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col23a1Q8K4G2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.54■■□□□ 1.52
Col23a1Q8K4G2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col23a1Q8K4G2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col23a1Q8K4G2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 AC122769.4-201ENSMUST00000228166 901 ntBASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.53■■□□□ 1.52
Col23a1Q8K4G2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Col23a1Q8K4G2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 Gm13836-201ENSMUST00000121159 501 ntBASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Col23a1Q8K4G2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Col23a1Q8K4G2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Col23a1Q8K4G2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Col23a1Q8K4G2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col23a1Q8K4G2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC24.48■■□□□ 1.51
Col23a1Q8K4G2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Col23a1Q8K4G2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Gm38205-201ENSMUST00000192243 258 ntBASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Col23a1Q8K4G2 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Col23a1Q8K4G2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Col23a1Q8K4G2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Col23a1Q8K4G2 Gm29994-201ENSMUST00000195495 1193 ntBASIC24.44■■□□□ 1.5
Col23a1Q8K4G2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col23a1Q8K4G2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col23a1Q8K4G2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col23a1Q8K4G2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col23a1Q8K4G2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col23a1Q8K4G2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms