Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnot3Q8K0V4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cnot3Q8K0V4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot3Q8K0V4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot3Q8K0V4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot3Q8K0V4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cnot3Q8K0V4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cnot3Q8K0V4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.57■□□□□ 0.56
Cnot3Q8K0V4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cnot3Q8K0V4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cnot3Q8K0V4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cnot3Q8K0V4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cnot3Q8K0V4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cnot3Q8K0V4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cnot3Q8K0V4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Gm12366-201ENSMUST00000121722 873 ntBASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Gm5786-201ENSMUST00000085368 882 ntBASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cnot3Q8K0V4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms