Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snapc1Q8K0S9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snapc1Q8K0S9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Snapc1Q8K0S9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Snapc1Q8K0S9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Snapc1Q8K0S9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.02■□□□□ 0.63
Snapc1Q8K0S9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.01■□□□□ 0.63
Snapc1Q8K0S9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Snapc1Q8K0S9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snapc1Q8K0S9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Gm7332-201ENSMUST00000118351 454 ntBASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Snapc1Q8K0S9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snapc1Q8K0S9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Gm12366-201ENSMUST00000121722 873 ntBASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Gm5786-201ENSMUST00000085368 882 ntBASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Snapc1Q8K0S9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms