Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trpm6Q8CIR4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trpm6Q8CIR4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.02■□□□□ 0.8
Trpm6Q8CIR4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trpm6Q8CIR4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trpm6Q8CIR4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trpm6Q8CIR4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trpm6Q8CIR4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trpm6Q8CIR4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trpm6Q8CIR4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20■□□□□ 0.79
Trpm6Q8CIR4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trpm6Q8CIR4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trpm6Q8CIR4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.98■□□□□ 0.79
Trpm6Q8CIR4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trpm6Q8CIR4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Gm12933-201ENSMUST00000120203 872 ntBASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trpm6Q8CIR4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
Trpm6Q8CIR4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpm6Q8CIR4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms