Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vcpip1Q8CDG3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.3■■□□□ 1
Vcpip1Q8CDG3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vcpip1Q8CDG3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Gm9870-201ENSMUST00000063874 645 ntBASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vcpip1Q8CDG3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vcpip1Q8CDG3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vcpip1Q8CDG3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Vcpip1Q8CDG3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vcpip1Q8CDG3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vcpip1Q8CDG3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Vcpip1Q8CDG3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vcpip1Q8CDG3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vcpip1Q8CDG3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcpip1Q8CDG3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Vcpip1Q8CDG3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Gm43530-201ENSMUST00000195920 274 ntBASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vcpip1Q8CDG3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms