Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf31Q8CCF0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Prpf31Q8CCF0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Prpf31Q8CCF0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf31Q8CCF0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Gm18284-201ENSMUST00000172604 624 ntBASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf31Q8CCF0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf31Q8CCF0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.67■■□□□ 1.06
Prpf31Q8CCF0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Gm8495-201ENSMUST00000188740 694 ntBASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prpf31Q8CCF0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prpf31Q8CCF0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Prpf31Q8CCF0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Prpf31Q8CCF0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prpf31Q8CCF0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf31Q8CCF0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf31Q8CCF0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prpf31Q8CCF0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Prpf31Q8CCF0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prpf31Q8CCF0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Gm11421-201ENSMUST00000122124 294 ntBASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Prpf31Q8CCF0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf31Q8CCF0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf31Q8CCF0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf31Q8CCF0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf31Q8CCF0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Prpf31Q8CCF0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms