Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx6Q8C7R7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rfx6Q8C7R7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.1■□□□□ 0.81
Rfx6Q8C7R7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfx6Q8C7R7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rfx6Q8C7R7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx6Q8C7R7 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.09■□□□□ 0.81
Rfx6Q8C7R7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rfx6Q8C7R7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfx6Q8C7R7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx6Q8C7R7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx6Q8C7R7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx6Q8C7R7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfx6Q8C7R7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfx6Q8C7R7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfx6Q8C7R7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx6Q8C7R7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx6Q8C7R7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx6Q8C7R7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.02■□□□□ 0.8
Rfx6Q8C7R7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx6Q8C7R7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx6Q8C7R7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.02■□□□□ 0.79
Rfx6Q8C7R7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx6Q8C7R7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms