Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.63■■□□□ 1.05
Lin9Q8C735 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lin9Q8C735 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.62■■□□□ 1.05
Lin9Q8C735 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.62■■□□□ 1.05
Lin9Q8C735 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Lin9Q8C735 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin9Q8C735 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.61■■□□□ 1.05
Lin9Q8C735 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Lin9Q8C735 Gm43530-201ENSMUST00000195920 274 ntBASIC21.61■■□□□ 1.05
Lin9Q8C735 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.61■■□□□ 1.05
Lin9Q8C735 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin9Q8C735 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Gm6139-201ENSMUST00000079261 882 ntBASIC21.6■■□□□ 1.05
Lin9Q8C735 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Lin9Q8C735 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Lin9Q8C735 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin9Q8C735 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin9Q8C735 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin9Q8C735 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin9Q8C735 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.59■■□□□ 1.05
Lin9Q8C735 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lin9Q8C735 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin9Q8C735 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.58■■□□□ 1.05
Lin9Q8C735 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Lin9Q8C735 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Lin9Q8C735 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lin9Q8C735 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lin9Q8C735 Mir7075-201ENSMUST00000184187 82 ntBASIC21.58■■□□□ 1.05
Lin9Q8C735 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lin9Q8C735 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lin9Q8C735 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lin9Q8C735 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Lin9Q8C735 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lin9Q8C735 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lin9Q8C735 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Lin9Q8C735 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.57■■□□□ 1.04
Lin9Q8C735 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Lin9Q8C735 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Lin9Q8C735 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Lin9Q8C735 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin9Q8C735 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.56■■□□□ 1.04
Lin9Q8C735 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin9Q8C735 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
Lin9Q8C735 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Lin9Q8C735 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Lin9Q8C735 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Lin9Q8C735 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.55■■□□□ 1.04
Lin9Q8C735 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Lin9Q8C735 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.55■■□□□ 1.04
Lin9Q8C735 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin9Q8C735 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lin9Q8C735 Mir6236-201ENSMUST00000184437 123 ntBASIC21.54■■□□□ 1.04
Lin9Q8C735 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.54■■□□□ 1.04
Lin9Q8C735 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin9Q8C735 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms