Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smad3Q8BUN5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Gm5408-201ENSMUST00000197998 747 ntBASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Gm20049-201ENSMUST00000219950 730 ntBASIC21.19■□□□□ 0.98
Smad3Q8BUN5 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smad3Q8BUN5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smad3Q8BUN5 Gm7290-201ENSMUST00000104990 617 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Gm12918-201ENSMUST00000120234 636 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Gm15710-201ENSMUST00000121821 636 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Gm5075-201ENSMUST00000196916 622 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smad3Q8BUN5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Gm13148-201ENSMUST00000118892 745 ntBASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smad3Q8BUN5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad3Q8BUN5 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.15■□□□□ 0.98
Smad3Q8BUN5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad3Q8BUN5 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.15■□□□□ 0.98
Smad3Q8BUN5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.15■□□□□ 0.98
Smad3Q8BUN5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad3Q8BUN5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad3Q8BUN5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smad3Q8BUN5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Smad3Q8BUN5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad3Q8BUN5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad3Q8BUN5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smad3Q8BUN5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smad3Q8BUN5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smad3Q8BUN5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Gm13836-201ENSMUST00000121159 501 ntBASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.13■□□□□ 0.97
Smad3Q8BUN5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smad3Q8BUN5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smad3Q8BUN5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms