Protein–RNA interactions for Protein: Q8BFQ9

Klhl42, Kelch-like protein 42, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhl42Q8BFQ9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Klhl42Q8BFQ9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Klhl42Q8BFQ9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Gm5812-201ENSMUST00000061073 957 ntBASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Klhl42Q8BFQ9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Klhl42Q8BFQ9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Klhl42Q8BFQ9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Klhl42Q8BFQ9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Klhl42Q8BFQ9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Klhl42Q8BFQ9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Klhl42Q8BFQ9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Gm10232-201ENSMUST00000089221 720 ntBASIC18.12■□□□□ 0.49
Klhl42Q8BFQ9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms