Protein–RNA interactions for Protein: Q80YR7

Clspn, Claspin, mousemouse

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClspnQ80YR7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Gm5112-201ENSMUST00000204407 2368 ntBASIC28.27■■■□□ 2.12
ClspnQ80YR7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ClspnQ80YR7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ClspnQ80YR7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ClspnQ80YR7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ClspnQ80YR7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC28.26■■■□□ 2.11
ClspnQ80YR7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC28.26■■■□□ 2.11
ClspnQ80YR7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ClspnQ80YR7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ClspnQ80YR7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ClspnQ80YR7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
ClspnQ80YR7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ClspnQ80YR7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ClspnQ80YR7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ClspnQ80YR7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
ClspnQ80YR7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC28.23■■■□□ 2.11
ClspnQ80YR7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Gm7143-201ENSMUST00000222811 859 ntBASIC28.23■■■□□ 2.11
ClspnQ80YR7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ClspnQ80YR7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
ClspnQ80YR7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ClspnQ80YR7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ClspnQ80YR7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ClspnQ80YR7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ClspnQ80YR7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ClspnQ80YR7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ClspnQ80YR7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.2■■■□□ 2.11
ClspnQ80YR7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ClspnQ80YR7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC28.2■■■□□ 2.11
ClspnQ80YR7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ClspnQ80YR7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
ClspnQ80YR7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
ClspnQ80YR7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.1
ClspnQ80YR7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ClspnQ80YR7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ClspnQ80YR7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ClspnQ80YR7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ClspnQ80YR7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ClspnQ80YR7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ClspnQ80YR7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ClspnQ80YR7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ClspnQ80YR7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ClspnQ80YR7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC28.18■■■□□ 2.1
ClspnQ80YR7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ClspnQ80YR7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ClspnQ80YR7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
ClspnQ80YR7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ClspnQ80YR7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
ClspnQ80YR7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
ClspnQ80YR7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
ClspnQ80YR7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms