Protein–RNA interactions for Protein: Q80X56

Trim69, E3 ubiquitin-protein ligase TRIM69, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim69Q80X56 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trim69Q80X56 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim69Q80X56 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim69Q80X56 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim69Q80X56 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.83■□□□□ 0.6
Trim69Q80X56 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Trim69Q80X56 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim69Q80X56 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Trim69Q80X56 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Trim69Q80X56 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim69Q80X56 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim69Q80X56 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim69Q80X56 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim69Q80X56 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim69Q80X56 Mir6236-201ENSMUST00000184437 123 ntBASIC18.81■□□□□ 0.6
Trim69Q80X56 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Trim69Q80X56 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim69Q80X56 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.8■□□□□ 0.6
Trim69Q80X56 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim69Q80X56 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim69Q80X56 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim69Q80X56 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim69Q80X56 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim69Q80X56 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim69Q80X56 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim69Q80X56 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim69Q80X56 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim69Q80X56 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim69Q80X56 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trim69Q80X56 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Trim69Q80X56 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim69Q80X56 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim69Q80X56 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.78■□□□□ 0.6
Trim69Q80X56 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim69Q80X56 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim69Q80X56 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Trim69Q80X56 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.77■□□□□ 0.6
Trim69Q80X56 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim69Q80X56 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim69Q80X56 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim69Q80X56 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.77■□□□□ 0.6
Trim69Q80X56 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.77■□□□□ 0.6
Trim69Q80X56 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.77■□□□□ 0.6
Trim69Q80X56 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim69Q80X56 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim69Q80X56 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim69Q80X56 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trim69Q80X56 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim69Q80X56 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.76■□□□□ 0.59
Trim69Q80X56 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim69Q80X56 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim69Q80X56 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim69Q80X56 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim69Q80X56 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim69Q80X56 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim69Q80X56 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim69Q80X56 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim69Q80X56 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim69Q80X56 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms