Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc18Q80WC3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc18Q80WC3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Gm13146-201ENSMUST00000118508 780 ntBASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Gm5408-201ENSMUST00000197998 747 ntBASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc18Q80WC3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tnrc18Q80WC3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.14■□□□□ 0.82
Tnrc18Q80WC3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Tnrc18Q80WC3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tnrc18Q80WC3 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.14■□□□□ 0.81
Tnrc18Q80WC3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.13■□□□□ 0.81
Tnrc18Q80WC3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc18Q80WC3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnrc18Q80WC3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Trmt13-210ENSMUST00000198454 880 ntBASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.1■□□□□ 0.81
Tnrc18Q80WC3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.09■□□□□ 0.81
Tnrc18Q80WC3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc18Q80WC3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc18Q80WC3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.08■□□□□ 0.81
Tnrc18Q80WC3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.08■□□□□ 0.81
Tnrc18Q80WC3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tnrc18Q80WC3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Gm13534-201ENSMUST00000121169 513 ntBASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Gm6365-201ENSMUST00000054711 744 ntBASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Tnrc18Q80WC3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Mir6982-201ENSMUST00000184354 68 ntBASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Gm10812-201ENSMUST00000099864 546 ntBASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tnrc18Q80WC3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnrc18Q80WC3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms