Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp8Q80U87 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.76■□□□□ 0.75
Usp8Q80U87 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp8Q80U87 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Usp8Q80U87 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp8Q80U87 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.75■□□□□ 0.75
Usp8Q80U87 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Usp8Q80U87 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp8Q80U87 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.75■□□□□ 0.75
Usp8Q80U87 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.74■□□□□ 0.75
Usp8Q80U87 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Gm7417-201ENSMUST00000192950 473 ntBASIC19.74■□□□□ 0.75
Usp8Q80U87 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Usp8Q80U87 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Usp8Q80U87 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Usp8Q80U87 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp8Q80U87 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp8Q80U87 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp8Q80U87 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp8Q80U87 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp8Q80U87 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.73■□□□□ 0.75
Usp8Q80U87 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp8Q80U87 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp8Q80U87 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp8Q80U87 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp8Q80U87 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp8Q80U87 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp8Q80U87 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp8Q80U87 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp8Q80U87 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.7■□□□□ 0.74
Usp8Q80U87 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp8Q80U87 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Usp8Q80U87 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp8Q80U87 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp8Q80U87 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp8Q80U87 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp8Q80U87 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.69■□□□□ 0.74
Usp8Q80U87 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp8Q80U87 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp8Q80U87 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp8Q80U87 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Usp8Q80U87 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp8Q80U87 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp8Q80U87 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp8Q80U87 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp8Q80U87 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.68■□□□□ 0.74
Usp8Q80U87 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp8Q80U87 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp8Q80U87 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms